PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM77559.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 268aa    MW: 30089.6 Da    PI: 4.4748
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM77559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.51.7e-14239746
                     HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     eE+e +++++  lG++ W++Ia++++ gRt++++k++w++
       OWM77559.1  2 EEEEMIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNT 39
                     9***************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEEEEMIIQL HSILGNKWSA IAARLPGRTD NEIKNYWNTR IRKRLLHMGI DPVTHSPRLD  60
LLDLSSILNN TPLYSSPQMS HLSSFLGPQT LVNPEILRLA SSIVSPHVEN PNCLPQNFQQ  120
NQYHQLLIQD QLHAPPIQEF PTCVPSSNNE ASQVMERNVD EYRDPLAAYN NGYYYVPEKN  180
YETPNPLQGN SFAPVLSAAT NSSSSTPGNS NSPCITGGGS IEDERESYCS NLLNYEIIPD  240
LLDMNSCNEI RQLIGDSEYL GPWNIQSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.15e-39MYB family protein