PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM77426.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HB-other

Protein Properties

Length: 1742aa MW: 195871 Da PI: 4.8105

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM77426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.5	5.5e-19	17	72	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps+++r+eL++klgLt+rq ++WF+ rR k+k+ OWM77426.1 17 PKRQMKTPFQLETLEKAYATETYPSEAMRAELSEKLGLTDRQLQMWFCHRRLKDKN 72 69***************************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 1742 aa Download sequence
MEAGSEDAPK IGEPAKPKRQ MKTPFQLETL EKAYATETYP SEAMRAELSE KLGLTDRQLQ 60 MWFCHRRLKD KNNTPAKKPR KSSAAVSAPE YSKDPVFAEP EPGSGYGSGS GSGSGSGSGS 120 GSSPYGSREL QRMGYGRDGD DVGVGRRYGE SPRTIMELRA IACVEAQLGE PLREDGPILG 180 MEFDPLPPDA FGAPIGTMEE HIRPDHSYDN KLYGRRDAIS NKAVGRSVHE YQFLHDQPGI 240 RYNTHGQVSQ NHLHDVVTDG PSARAPSSSH GIQKLSNTHG VQGQLLRVCR VSQEDREGPG 300 ISASPGYDDR LQQRDPLTSM RLNSPQGAYP VSGVENSLAI SDGKVFHNDT GLHAGKRKTE 360 ERMRKEIERY DRERRKEEER LVREKQREEE RLLREQRKEM ERRERFLQKE YMRAEKKRQK 420 EEQRREKEAE RRKVAMEKAT ARRIAKESME LMEDEQLELM ELAAAKKGLP SIVHLDHDTL 480 QNLDMFRDSL SAFPPQTIPL KRPFAVQPWL SSEENAGNLL MAWRFLITFA DVLGLWPFTL 540 DEFVQAFHDY NSRLLGEIHL ALLKATIKDI EDVSRTSAAG LGTNQNGAAN PEGGHPQIVE 600 GAYAWGFDIQ KWQKHLNPLT WPEIFRQLAL SAGFGPQLKK RTVVQPHLQE GDEVKDCEDI 660 VSTLRSGSAA EKALAIMREK GLLLPRRSRH RLTPGTVKFA AFHVLSLEGS KGLTVLDLAD 720 KIQKSGLRDL STSKTPEASI SVALTRDTKL FERIAPSTYR VRAAYRKDPT DAEAILSEAR 780 KKIRIFENGL LAEEDADEVE RDDDAERDDD AERDEDAQRD EESEGDVDED PDADDIAAPL 840 GVIKEDDQYN QENELPVIKE EEPMLNDGMN MENENGRDFI SCPVNDFKDT AEQCGDGEGI 900 DDSKDQENME IDESNSGESW VRGLTEGEYS HLSVEERLNA LVALIGVANE GNSIRAVLED 960 RLEAANALKK QMWAEVQLDK SRLKDEFISK LDLSSFTGGR TEAQVRDFSV DGNQSPWPAA 1020 DTKNTEASLS LAEDHKLLLG PQAGVQNDPS NLSTDRALVV VQDPSGVPDN SNHNGYVSRR 1080 SRSQLKSYIA QRAEEIYVYR SLPLGLDRRR NRYWQFVASS SRNDPGSGRI FVELNNGSWR 1140 LIDSEEAFDA LLMSLDVRGI RESHLRVMLL KIEKLFRENV RRSLESAPQI RSSVKNEAVE 1200 MDSSPDCRGV GSPSSMVCGS SHDISEASSS FRIEIGRNQF EKKAALRRYQ DFLKWASREC 1260 SNSFPIGAMR TGKRRSDPVL FICDSCLDTY LCETKHCFSC HATIADNFDF SRHVMECEDR 1320 RKLDQKDGHV LVSSVPLGIR FLKGLLAYVE VLIPPEALQS FWTEDLRRSW GMKLSAFSSP 1380 EEFLQMLTLL EGALRREYLS PEFESTRDLL SLAESSVQDY FDLEHVSVLP WIPQTIAASA 1440 LRLLELESSI IYVKPEQPES RNVDSVREET VQRLPLKPVV LKSAKVDLPE GDQRIYLKGN 1500 PGEVSNGRKS NKRGNVARDR TSGKKWQRRS SAARSDVSGR RNARNSENLL RQQQGRTQLA 1560 QGGSYVRGRR TVRKRRAENK VGEQALLGHM GADTAGVGSR RLNEAWHHEP RYPAHVEEAS 1620 VNSDSVEDDE NDNENENENE AVMGYDIEGN WGEGYAGTSN GWNRNFMKEE PGEEEEEEDM 1680 GVSEEEEDYN ELEEEDTGQG FGGTMDMRGD VEYGGLEPME NDDEDDEEEE GSEMAGSEDY 1740 SE

Sequence ? help Back to Top

Protein Sequence Length: 1742 aa Download sequence

MEAGSEDAPK IGEPAKPKRQ MKTPFQLETL EKAYATETYP SEAMRAELSE KLGLTDRQLQ  60
MWFCHRRLKD KNNTPAKKPR KSSAAVSAPE YSKDPVFAEP EPGSGYGSGS GSGSGSGSGS  120
GSSPYGSREL QRMGYGRDGD DVGVGRRYGE SPRTIMELRA IACVEAQLGE PLREDGPILG  180
MEFDPLPPDA FGAPIGTMEE HIRPDHSYDN KLYGRRDAIS NKAVGRSVHE YQFLHDQPGI  240
RYNTHGQVSQ NHLHDVVTDG PSARAPSSSH GIQKLSNTHG VQGQLLRVCR VSQEDREGPG  300
ISASPGYDDR LQQRDPLTSM RLNSPQGAYP VSGVENSLAI SDGKVFHNDT GLHAGKRKTE  360
ERMRKEIERY DRERRKEEER LVREKQREEE RLLREQRKEM ERRERFLQKE YMRAEKKRQK  420
EEQRREKEAE RRKVAMEKAT ARRIAKESME LMEDEQLELM ELAAAKKGLP SIVHLDHDTL  480
QNLDMFRDSL SAFPPQTIPL KRPFAVQPWL SSEENAGNLL MAWRFLITFA DVLGLWPFTL  540
DEFVQAFHDY NSRLLGEIHL ALLKATIKDI EDVSRTSAAG LGTNQNGAAN PEGGHPQIVE  600
GAYAWGFDIQ KWQKHLNPLT WPEIFRQLAL SAGFGPQLKK RTVVQPHLQE GDEVKDCEDI  660
VSTLRSGSAA EKALAIMREK GLLLPRRSRH RLTPGTVKFA AFHVLSLEGS KGLTVLDLAD  720
KIQKSGLRDL STSKTPEASI SVALTRDTKL FERIAPSTYR VRAAYRKDPT DAEAILSEAR  780
KKIRIFENGL LAEEDADEVE RDDDAERDDD AERDEDAQRD EESEGDVDED PDADDIAAPL  840
GVIKEDDQYN QENELPVIKE EEPMLNDGMN MENENGRDFI SCPVNDFKDT AEQCGDGEGI  900
DDSKDQENME IDESNSGESW VRGLTEGEYS HLSVEERLNA LVALIGVANE GNSIRAVLED  960
RLEAANALKK QMWAEVQLDK SRLKDEFISK LDLSSFTGGR TEAQVRDFSV DGNQSPWPAA  1020
DTKNTEASLS LAEDHKLLLG PQAGVQNDPS NLSTDRALVV VQDPSGVPDN SNHNGYVSRR  1080
SRSQLKSYIA QRAEEIYVYR SLPLGLDRRR NRYWQFVASS SRNDPGSGRI FVELNNGSWR  1140
LIDSEEAFDA LLMSLDVRGI RESHLRVMLL KIEKLFRENV RRSLESAPQI RSSVKNEAVE  1200
MDSSPDCRGV GSPSSMVCGS SHDISEASSS FRIEIGRNQF EKKAALRRYQ DFLKWASREC  1260
SNSFPIGAMR TGKRRSDPVL FICDSCLDTY LCETKHCFSC HATIADNFDF SRHVMECEDR  1320
RKLDQKDGHV LVSSVPLGIR FLKGLLAYVE VLIPPEALQS FWTEDLRRSW GMKLSAFSSP  1380
EEFLQMLTLL EGALRREYLS PEFESTRDLL SLAESSVQDY FDLEHVSVLP WIPQTIAASA  1440
LRLLELESSI IYVKPEQPES RNVDSVREET VQRLPLKPVV LKSAKVDLPE GDQRIYLKGN  1500
PGEVSNGRKS NKRGNVARDR TSGKKWQRRS SAARSDVSGR RNARNSENLL RQQQGRTQLA  1560
QGGSYVRGRR TVRKRRAENK VGEQALLGHM GADTAGVGSR RLNEAWHHEP RYPAHVEEAS  1620
VNSDSVEDDE NDNENENENE AVMGYDIEGN WGEGYAGTSN GWNRNFMKEE PGEEEEEEDM  1680
GVSEEEEDYN ELEEEDTGQG FGGTMDMRGD VEYGGLEPME NDDEDDEEEE GSEMAGSEDY  1740
SE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein