PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM77108.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 397aa MW: 43820.2 Da PI: 6.9261

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM77108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.3e-09	299	341	8	55
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + r+RR++i +++ L++l+P +K++ a++L +A +Y+k Lq OWM77108.1 299 AARQRREKISERIRVLQRLVPGG-----TKMDTASMLDEAANYLKFLQ 341 569****************87.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MECFVWDGLE VTECMPLWSD DTLGRHPSRY GPAPYDVIDS IPHQIDLQRA QASLIEYSNS 60 ARLVQSNNQV HCSVLIAPTS QSTHPILSSC MNLQPVGTPV AVGPADNGPN VANSSTKDSL 120 DMFDCLFSAT NGNTEGSVEE CAMSSSMILR DVHSRSFWNF GSCGAISSGE SENNSASLQD 180 NKAKGKEGTN KRKNNVSEGG FRLISEVNPP KSKRVRSEKS RSENQNLAPS SSNISFQLYP 240 LSSSPTSSID QEPDQEAIAQ MKEMIYRAAA FRPVNLGLEV VEKPKRKNVR ISRDPQTVAA 300 RQRREKISER IRVLQRLVPG GTKMDTASML DEAANYLKFL QSQIKQLENL EPKIDFSSTN 360 CLPINNLIFS SLSFNHAFSS MQVHPFPLQQ PDHSPKV

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MECFVWDGLE VTECMPLWSD DTLGRHPSRY GPAPYDVIDS IPHQIDLQRA QASLIEYSNS  60
ARLVQSNNQV HCSVLIAPTS QSTHPILSSC MNLQPVGTPV AVGPADNGPN VANSSTKDSL  120
DMFDCLFSAT NGNTEGSVEE CAMSSSMILR DVHSRSFWNF GSCGAISSGE SENNSASLQD  180
NKAKGKEGTN KRKNNVSEGG FRLISEVNPP KSKRVRSEKS RSENQNLAPS SSNISFQLYP  240
LSSSPTSSID QEPDQEAIAQ MKEMIYRAAA FRPVNLGLEV VEKPKRKNVR ISRDPQTVAA  300
RQRREKISER IRVLQRLVPG GTKMDTASML DEAANYLKFL QSQIKQLENL EPKIDFSSTN  360
CLPINNLIFS SLSFNHAFSS MQVHPFPLQQ PDHSPKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	4e-66	bHLH family protein