PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM76674.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 479aa MW: 52905.2 Da PI: 8.6162

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM76674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.6	9.3e-32	176	233	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++C++kkkve+s d++v+ei+Y+g+H h+k OWM76674.1 176 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCQTKKKVETSL-DGHVTEIVYKGTHSHPK 233 8**************************************.*************85 PP
2	WRKY	103.9	8.7e-33	338	396	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k+ver+++d ++v++tYeg+Hnh+ OWM76674.1 338 LDDGYRWRKYGQKVVKGNHNPRSYYKCTSTGCPVRKHVERASHDMRAVITTYEGKHNHD 396 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MERKIPNVSW GFLGPESRTS SRALSPPPIS PSSYFTVPPG LVSPVDFMDS AMLFPTSNDA 60 SSPSFGDFAG EGFNWRSNYS GNLQQSVKGE DRNFGELSCQ VQARPSSSMI SVEVSSSSSK 120 APEPWNYPKS SSQFDFSSEK KAETSGINPV QGQANPQSRA PQPFHSYYTR DPKKTDDGYN 180 WRKYGQKQVK GSENPRSYYK CTFPNCQTKK KVETSLDGHV TEIVYKGTHS HPKPQSNRRN 240 AFQSIQPNSL EKVLDQSVQM RADSDYNIAH QDSSDSIGDG EFEPDSRVVN AGGGDEEGES 300 DSKRRKGETE YESFSAHGNS MVREPKVIVQ TMSEIDILDD GYRWRKYGQK VVKGNHNPRS 360 YYKCTSTGCP VRKHVERASH DMRAVITTYE GKHNHDVPAA RGSGSHMLNR PQPSSFNTIA 420 PSPLRPSTVA GSANHKANYI GSVSNLRPQG SASSTQSVLE MLQNPNTFAF TSGMPTDFI

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MERKIPNVSW GFLGPESRTS SRALSPPPIS PSSYFTVPPG LVSPVDFMDS AMLFPTSNDA  60
SSPSFGDFAG EGFNWRSNYS GNLQQSVKGE DRNFGELSCQ VQARPSSSMI SVEVSSSSSK  120
APEPWNYPKS SSQFDFSSEK KAETSGINPV QGQANPQSRA PQPFHSYYTR DPKKTDDGYN  180
WRKYGQKQVK GSENPRSYYK CTFPNCQTKK KVETSLDGHV TEIVYKGTHS HPKPQSNRRN  240
AFQSIQPNSL EKVLDQSVQM RADSDYNIAH QDSSDSIGDG EFEPDSRVVN AGGGDEEGES  300
DSKRRKGETE YESFSAHGNS MVREPKVIVQ TMSEIDILDD GYRWRKYGQK VVKGNHNPRS  360
YYKCTSTGCP VRKHVERASH DMRAVITTYE GKHNHDVPAA RGSGSHMLNR PQPSSFNTIA  420
PSPLRPSTVA GSANHKANYI GSVSNLRPQG SASSTQSVLE MLQNPNTFAF TSGMPTDFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-104	WRKY family protein