PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76291.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Trihelix
Protein Properties Length: 359aa    MW: 39031.1 Da    PI: 4.7952
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix85.56.5e-2744138186
    trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rWt+qe+l+Li++++  e+r+rrg+          ++ +W++vs++++++g++r+p+qC+++w+nl+++ykkike+e + +++++s + + ++l+
  OWM76291.1  44 RWTRQEILVLIQGKKVAENRVRRGRssglatgsgPAESKWSSVSNYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWEARIRDDTESFWIMRNDLR 138
                 8*********************9877788888889********************************************9999999999988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MALEQLSLGP ARADPDGAAN GAESRPAASA DGADDGGRTP RLPRWTRQEI LVLIQGKKVA  60
ENRVRRGRSS GLATGSGPAE SKWSSVSNYC KRHGVNRGPV QCRKRWSNLA GDYKKIKEWE  120
ARIRDDTESF WIMRNDLRRE RRLPGFFDRE VYDILDRGPS SSAPAAAPGL DLALGPAAMD  180
VEPEKKAQAA EEADAEGEAV FDSSRGGAAA EDGLFSDFEP EEGSTPDKGA AAAAEAEEVP  240
AAPEPISEKQ FESVFRGSRV QGTSNEEQPP GNPELGSTSQ EAWKRKRVAT DDQEEATTTS  300
LQYHLVDALE RNGKLLIAQL EAQNKNSQLD REQRKDQADG LLAILNKLTD ALVRIAEKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.15e-99Trihelix family protein