PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM76284.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 175aa MW: 19127.1 Da PI: 9.9393 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.7 | 1.8e-20 | 5 | 54 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f taeeAa a++ a+++++g OWM76284.1 5 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEEAAMAYDTAALRFKG 54 7********.**********94....45************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MRRRHYRGVR QRPWGKWAAE IRDPKKAARV WLGTFETAEE AAMAYDTAAL RFKGAKAKLN 60 FPERVQGLGY YDTSELVMSS SQANNPPISM PSREDHFPDL IQYAQLLSSN NTDIPLLDNS 120 NISFVSQGTT PGMHTSSPSS SSSSSSTSSS STTSTQQQGL SSSDFRGKGK SLDPG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 3e-33 | ERF family protein |