PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM76278.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 24721.7 Da PI: 10.1993 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.5e-20 | 56 | 105 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + + +r++lg+f taeeAa a+++a+++++g OWM76278.1 56 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAEEAAMAYDRAALRFKG 105 7********.**********9...3.35************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MVAVLAQVMG SSPHDQRPVT MIDSTRMAVP RVAHIERETA SSHLIPDQES TMRRRHYRGV 60 RQRPWGKWAA EIRDPNKAAR VWLGTFETAE EAAMAYDRAA LRFKGAKAKM NFPERVQGLG 120 YYDTPKVVMS SSQANNPPIS MPSQEVHFPD LTQYAQLLSS NNTDIPLLIN SNISFISQGT 180 TLGMHTSSPS SSSSSSTPSS STTSTQQQGS SSSGFRGKGK SLDPGY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 4e-35 | ERF family protein |