PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76114.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 355aa    MW: 39389.7 Da    PI: 7.0815
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.3e-1853102255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  OWM76114.1  53 RYRGVRRRP-WGRYAAEIRDPQ----SkERKWLGTFDTAEEAACAYDCAARAMRG 102
                 59*******.**********93....35*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MEEAFRRLNG HPSHSTEPAE PFPESHKPKN SSKRAHKDSS IGGGSTAAST TMRYRGVRRR  60
PWGRYAAEIR DPQSKERKWL GTFDTAEEAA CAYDCAARAM RGIKARTNFV YPTTAFSHGD  120
LFSSFPHPSA PAHFSLHKPH PGHHPHRQPT PTPLPPALMD FPARSSFSRS TNFTCPAPQG  180
IASRRSNSNN NAMLLLRDLI NNTSSSNSLP AGLLDPPPEQ PPLIGHQEFL PSDHIPMDYK  240
SDHGEEHKAA EPMNGAEFFP QEPSDSGLLE EVIQRFFPKL PPPKSTSPPP MESVSEDYNK  300
KEHHQIDINS SGGFGDLVDY YHCPGLGFQQ QHESVAAPAT EFLDGPPRYQ FIPYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.18e-14ERF family protein