PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM76064.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 483aa MW: 53909.9 Da PI: 7.5934

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM76064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.8e-09	302	344	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +E+rRR r++++++ Lr ++Pk + K++ a+iL A+ YI +L OWM76064.1 302 LAEQRRRTRLKEKLFALRAIVPKiS------KMDMAAILIDAMAYIEEL 344 58*******************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MPMAVPSFAE QTSMLQAEET AAMDVRALHR ALEWLRPFVE TMGWEYVVVW KLGDDPSRFI 60 EWVGCCCSGF RCGDVKEEKK ESCGHLAPLC RDGYCKHLVR SRACEALSQL PSLMPLYSGL 120 HGEVVISDEH RWISPAVSSD SNSSPESGGT LVLIPVAGGI VELFNAKHIA EERKIVEIIK 180 SQCLFFSKQE SMMTSLDRLF LENYSKHSAV PICTPSMVHL PQFLAPRIQS SPHNNSIYEG 240 SSSSSNLSSE NTPIAYFGCS ESRDVQNSLR PQNISGSGIK SNSREAGGRS REGQNGPSKN 300 LLAEQRRRTR LKEKLFALRA IVPKISKMDM AAILIDAMAY IEELKGEMKS LQDELKNMEE 360 EECRLNSRES KIPKLNGENK FSKNSFAAED DRDYLYLGLP YKKEVQVEVN QVGKGALLVR 420 LLCEKRAGWF SRLMEALCSS GLIILDANVT TLKDRALTVL RLEGQKDIYP KKLKDSLTKI 480 ASS

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MPMAVPSFAE QTSMLQAEET AAMDVRALHR ALEWLRPFVE TMGWEYVVVW KLGDDPSRFI  60
EWVGCCCSGF RCGDVKEEKK ESCGHLAPLC RDGYCKHLVR SRACEALSQL PSLMPLYSGL  120
HGEVVISDEH RWISPAVSSD SNSSPESGGT LVLIPVAGGI VELFNAKHIA EERKIVEIIK  180
SQCLFFSKQE SMMTSLDRLF LENYSKHSAV PICTPSMVHL PQFLAPRIQS SPHNNSIYEG  240
SSSSSNLSSE NTPIAYFGCS ESRDVQNSLR PQNISGSGIK SNSREAGGRS REGQNGPSKN  300
LLAEQRRRTR LKEKLFALRA IVPKISKMDM AAILIDAMAY IEELKGEMKS LQDELKNMEE  360
EECRLNSRES KIPKLNGENK FSKNSFAAED DRDYLYLGLP YKKEVQVEVN QVGKGALLVR  420
LLCEKRAGWF SRLMEALCSS GLIILDANVT TLKDRALTVL RLEGQKDIYP KKLKDSLTKI  480
ASS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	3e-64	bHLH family protein