PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75968.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 638aa MW: 69904 Da PI: 6.623

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	3e-30	266	325	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hnh+ OWM75968.1 266 MNDGCQWRKYGQKIAKGNPCPRAYYRCTISpSCPVRKQVQRCAEDMSILITTYEGNHNHS 325 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MKSNGDEESA SNSDANREPL CVYHNQEGHG SRIDQADETE RSPPPDRTTM PEEETPRITI 60 VRTLDRNSKA SSSNDHESQE DQLKSAQVEM GEVREENERL KSLLSQLAKD YQSLQKHFHD 120 VLQQDETHKK RAIPTPTPVL ANDQENKQEP DEFVSLTLGR TLSGVNKTED QRKIDLNEAE 180 KDNEMLREEL KLGLDCRYAE QSPTEPVKNR TSGEGFEELR EDDITEIWPP SKILKTMKST 240 DDESSQSSQG KKARVSVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTISPSCPV 300 RKQVQRCAED MSILITTYEG NHNHSLPISA TAMASTTSAA VSMLQSRSSS SQQDPKAPPA 360 TTHNNSTCTT SASLHGLNFS LSQDSRSNGQ LHFPYSSIST CNSHPTITLD LTSAINPSNY 420 DRFSSSILTP PVPKYSSISA PCLSFSSSST ALASSQLLSP WDTSNFLNYG ATPTNQRSIQ 480 FRKCASDLGR QASQEHSYKP YLQMSSVTNS SEKSLMPETL AAATKAIATN PSFHSALAAA 540 LSSCIGNNGT SGGYRGRGEN SELKYVLKAG DSSSASSTQI PGQSRVLCAS NFVSKQANMN 600 LQQQGGLINL FQPSLSLSTS TGANSGSPTE NYKDRIKF

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MKSNGDEESA SNSDANREPL CVYHNQEGHG SRIDQADETE RSPPPDRTTM PEEETPRITI  60
VRTLDRNSKA SSSNDHESQE DQLKSAQVEM GEVREENERL KSLLSQLAKD YQSLQKHFHD  120
VLQQDETHKK RAIPTPTPVL ANDQENKQEP DEFVSLTLGR TLSGVNKTED QRKIDLNEAE  180
KDNEMLREEL KLGLDCRYAE QSPTEPVKNR TSGEGFEELR EDDITEIWPP SKILKTMKST  240
DDESSQSSQG KKARVSVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTISPSCPV  300
RKQVQRCAED MSILITTYEG NHNHSLPISA TAMASTTSAA VSMLQSRSSS SQQDPKAPPA  360
TTHNNSTCTT SASLHGLNFS LSQDSRSNGQ LHFPYSSIST CNSHPTITLD LTSAINPSNY  420
DRFSSSILTP PVPKYSSISA PCLSFSSSST ALASSQLLSP WDTSNFLNYG ATPTNQRSIQ  480
FRKCASDLGR QASQEHSYKP YLQMSSVTNS SEKSLMPETL AAATKAIATN PSFHSALAAA  540
LSSCIGNNGT SGGYRGRGEN SELKYVLKAG DSSSASSTQI PGQSRVLCAS NFVSKQANMN  600
LQQQGGLINL FQPSLSLSTS TGANSGSPTE NYKDRIKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-67	WRKY family protein