PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75806.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 362aa    MW: 39448.4 Da    PI: 6.6592
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.3e-14173219354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  OWM75806.1 173 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 219
                 79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MSGMKQEDIH HQGECSQSSV HNLQPYHQQD QLLFHQHHHG PDIFSGGGGD GSGGGLIFPE  60
VTPILPWPLP PVHAFNPSQF SPSANPSPRD HHIIDPFLLP PPPPPYGSFF NRRAASSLQF  120
AYDGPTSDHL RIISDTLGVG AVPGSGAPFG LQAELGKMTA QEIMDAKALA ASKSHSEAER  180
RRRERINNHL AKLRSLLPST TKTDKASLLA EVIQHVKELK RQTSLIAETS PIPTEIDELM  240
VDTSDEDGKF LIKASICCED RPDLLPDLIK TLKAMRLRTL KAEITTLGGR VKNILFITGE  300
EDLSSNSSGD HQQSPQQYSI SSIQEALKAV VEKAGGNGDE SSSASAKRQR TTNINIIEHR  360
SL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179184ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.18e-89bHLH family protein