PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75716.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 319aa    MW: 34595.9 Da    PI: 8.5986
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.5e-20145195255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+     +r++lg+f+ta eAaka+++a+ +l+g
  OWM75716.1 145 HYRGVRRRP-WGKFAAEIRDPTRK--GTRVWLGTFDTAIEAAKAYDRAAFRLRG 195
                 8********.**********8542..4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MASHVDETTT TTLDLIRDHL LDDSVPSLDT LITALRFPQA PLCSPNRGSY DEYDDPPSNN  60
QPHNYAQLLL LQSEAKPKPP QPLIIRQHSR PPKPSALSAR RPAINVAIPM APMGVITKGT  120
TVDHPSTTSQ LQSVSQLESG GSKKHYRGVR RRPWGKFAAE IRDPTRKGTR VWLGTFDTAI  180
EAAKAYDRAA FRLRGSKAIL NFPLDAGKSP AGPSPPAPVS KRERPSDWEL ELDQNNGDEE  240
GGGGPNYKKK AVKREPPSSS ESSSSTGDAG GANCPLTPSC WMPFWDFADV NEDSIFSVPP  300
LSPLSPYRSV GCAAPLLVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.18e-43ERF family protein