PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM75715.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 29013 Da PI: 5.3993 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.5e-18 | 131 | 182 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+++AeIrdp k r++lg+f+t +Aaka++ a+ k++g OWM75715.1 131 CHYRGVRRRP-WGKYAAEIRDP---ArKGSRVWLGTFDTDVDAAKAYDCAAFKMRG 182 79********.**********8...4445**********99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDDFSALELI RQHLLADDTS FDVHSLDTTV TSFISALSFD AELCSVKIES PFSESESESE 60 SESSSSPSPT SGNDDLLYIK PEHIDRNHLH LVTLNHKYSL PRESPPPEVL KRLSRTRSDP 120 DQHDQMIIGH CHYRGVRRRP WGKYAAEIRD PARKGSRVWL GTFDTDVDAA KAYDCAAFKM 180 RGRKAILNFP SEAGDAAPPA NAGRKRRRKL KAREDIQEET AGAEPGVAVA ESTESPPAGA 240 GDSCWDDQED VRVQSVHRDN N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 203 | 210 | GRKRRRKL |
2 | 204 | 208 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 6e-39 | ERF family protein |