PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75659.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Trihelix

Protein Properties

Length: 1002aa MW: 110904 Da PI: 7.0623

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75659.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.5	4e-09	242	300	22	81
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 +rgk ++ + +ev++++ ++g++r +k+ kw+n+ ++++k+ e+e++++ e++ +y OWM75659.1 242 GRGKTRAEKDREVAEFLNRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQV-GKSY 300 57888999999*************************************9965555.3445 PP

Sequence ? help Back to Top
Protein Sequence Length: 1002 aa Download sequence
MADTKLSDTP KKQQQQHQPQ PSQPPQPSSS PALDPLDDSA ETRQQPPPHH QHQPPPPPAA 60 VVVTGSPFIS APLFIPAIGA GGAAGAYEQF EAVNPKRPRF GQWKLLTSPT HHQLPTKQAT 120 QMAGLPSESS PSPTHNIPQA HVTTASSSDT ASSPTTHSPI PGGGTGHETS KPEGGAGEQP 180 GFHHQHHHPQ FRKGKYVSPV WKPNEMLWLA RAWRMQYQGG SAESDPAGQV GVGGDAAAGP 240 PGRGKTRAEK DREVAEFLNR HGVNRDAKTA GTKWDNMLGE FRKVYEWERG GEREQVGKSY 300 FRLSPYERKI HRLPASFDEE VFEELSQFMG PRMRNPQSRV SSSIAGAGDE GRAAAGLSGA 360 TSRVPLPPSF KDDELPLTAR AKQLAVTAGM ETFFPGSGRG SLLLGYEPAS SLLDVIGPSL 420 ASSKELRRIG KVRMTWEESV SLWAEEGEHH RGRVKLQGSM SFLNADELTY FDEATVACPM 480 EAFEDGPFRG FSVDRFVPGQ QVKVFGRRKS SSLASASAVP PWEFQDPTDY YVGCLRVPPP 540 TLPSLFELSW YLQEPPPEEL RFPLRRDVYR DLPQGKETFF ITSHEPLDCR AFTFDILSPI 600 IRNDPGISIP TASSRDSFIG LWDDCINRVV SKFCPIEIVM IRKPSSLISE TLQDQWPNVT 660 GFLRNFCLWR GEETDQLRDS YIEPSTSIIG KLLWTFADLP YILGYYAVAY MVTFCALSRS 720 QDRIIRTDLY SLDLTLPSDR MKALIPCYRI AGLLALLGDR CFNNMASYKL SPYSDFERID 780 LGNGNIIEMT PNTVTRVFTS KRKWAAVKEI YDFLNQRVPH AEFIVQSSEK DLAHVFKPRG 840 IKSKPVSFEQ LVEALMYVTK ALVALHDLCF MHRDLSWDKV VRRVDNEGEW VVCGFDEAVA 900 SPQIYPRGGE LVARGAHAPE MGRGLHNVKV DVWGVGYLVK TCGLDGGVPK LLRELQNRCL 960 DLNPEHRPTA ADCYHHLLQL QSAFHTTAAP SGVGGSSGGG TY

Sequence ? help Back to Top

Protein Sequence Length: 1002 aa Download sequence

MADTKLSDTP KKQQQQHQPQ PSQPPQPSSS PALDPLDDSA ETRQQPPPHH QHQPPPPPAA  60
VVVTGSPFIS APLFIPAIGA GGAAGAYEQF EAVNPKRPRF GQWKLLTSPT HHQLPTKQAT  120
QMAGLPSESS PSPTHNIPQA HVTTASSSDT ASSPTTHSPI PGGGTGHETS KPEGGAGEQP  180
GFHHQHHHPQ FRKGKYVSPV WKPNEMLWLA RAWRMQYQGG SAESDPAGQV GVGGDAAAGP  240
PGRGKTRAEK DREVAEFLNR HGVNRDAKTA GTKWDNMLGE FRKVYEWERG GEREQVGKSY  300
FRLSPYERKI HRLPASFDEE VFEELSQFMG PRMRNPQSRV SSSIAGAGDE GRAAAGLSGA  360
TSRVPLPPSF KDDELPLTAR AKQLAVTAGM ETFFPGSGRG SLLLGYEPAS SLLDVIGPSL  420
ASSKELRRIG KVRMTWEESV SLWAEEGEHH RGRVKLQGSM SFLNADELTY FDEATVACPM  480
EAFEDGPFRG FSVDRFVPGQ QVKVFGRRKS SSLASASAVP PWEFQDPTDY YVGCLRVPPP  540
TLPSLFELSW YLQEPPPEEL RFPLRRDVYR DLPQGKETFF ITSHEPLDCR AFTFDILSPI  600
IRNDPGISIP TASSRDSFIG LWDDCINRVV SKFCPIEIVM IRKPSSLISE TLQDQWPNVT  660
GFLRNFCLWR GEETDQLRDS YIEPSTSIIG KLLWTFADLP YILGYYAVAY MVTFCALSRS  720
QDRIIRTDLY SLDLTLPSDR MKALIPCYRI AGLLALLGDR CFNNMASYKL SPYSDFERID  780
LGNGNIIEMT PNTVTRVFTS KRKWAAVKEI YDFLNQRVPH AEFIVQSSEK DLAHVFKPRG  840
IKSKPVSFEQ LVEALMYVTK ALVALHDLCF MHRDLSWDKV VRRVDNEGEW VVCGFDEAVA  900
SPQIYPRGGE LVARGAHAPE MGRGLHNVKV DVWGVGYLVK TCGLDGGVPK LLRELQNRCL  960
DLNPEHRPTA ADCYHHLLQL QSAFHTTAAP SGVGGSSGGG TY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-07	Trihelix family protein