PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75564.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 308aa    MW: 34080.7 Da    PI: 7.1881
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.53.6e-30117178159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK++ g++fpr+YYrCt++   gC ++k+v+rs+edp v+eitY+g+H+++
  OWM75564.1 117 LDDGYSWRKYGQKDILGAKFPRGYYRCTHRniqGCLATKQVQRSDEDPMVFEITYRGRHTCN 178
                 59***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MELAKHLQLH LNSPSSSNET REALAVGILA SYQKALSMLS WRSPMMGEPS SAVGAGVGTF  60
RKSESPPSLS GGSPHSGDSD REVRDQEHGD ASKKRKAVAR WTKQVRVGPG VELECPLDDG  120
YSWRKYGQKD ILGAKFPRGY YRCTHRNIQG CLATKQVQRS DEDPMVFEIT YRGRHTCNEP  180
ARGINPQTST PEQNHQHQQQ HLSPEILQNL RGLRVITEDL DSQNQPLFPH FNFTHTQSFL  240
PPFVSSGGND VLQGNAEQSS FHISGSDHLS EIVSAATSRT NSTTPGSIDY SISEFNQNTP  300
FGSPDFFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.11e-48WRKY family protein