PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75440.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 556aa MW: 60347.9 Da PI: 7.3097

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	120	177	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkg+ef rsYY+Ct+++C vkk+vers ++++++++Y g+H+h+k OWM75440.1 120 EDGYNWRKYGQKNVKGNEFIRSYYKCTHPNCLVKKQVERSL-EGQITDTVYFGQHEHPK 177 7**************************************.*************85 PP
2	WRKY	33.3	1e-10	296	318	1	23
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ++Dgy+WrKYGqK vkg+++p + OWM75440.1 296 VNDGYRWRKYGQKLVKGNPNPSG 318 58******************975 PP
3	WRKY	56.9	4.1e-18	367	406	20	59
S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 + rsYYrC+s+gCpvkk+ver+++dpkvv +tYeg+H+h+ OWM75440.1 367 HCRSYYRCSSPGCPVKKHVERASHDPKVVMTTYEGQHDHD 406 78*************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MVPCTEGSPS SSDPKTQAVT VTPVEGAAAE KPHREIKQMS PDSRAHPSQS DPEGANSCTA 60 PPKTSGGSDR DSCLVQSVQE GKSASINFER VLFPSPKGAL SSPPTHGGSA SSGKAEKASE 120 DGYNWRKYGQ KNVKGNEFIR SYYKCTHPNC LVKKQVERSL EGQITDTVYF GQHEHPKPNI 180 NIPLAVGLVV SIVEEKPEKP SSTVTEEKPS EVGGKTCHQV KTTDTPLSPT VTASNDVRSA 240 ALSSPRSRLR DEFDNDDGPS SKRKKKENRG VEAAAVDKAT GDTRLIIQTT SEVDIVNDGY 300 RWRKYGQKLV KGNPNPSGAE SCKTSPRLVL HKFLVCCIWI DFILSQSMSS LSYDFYVELR 360 WVTSLCHCRS YYRCSSPGCP VKKHVERASH DPKVVMTTYE GQHDHDMPAA RMVTRNPAGT 420 NGATIAQNDE GRIKSGEGEA VSADAAVREG NSDPPSKSTE QQTDKSENKC GRARSLNAEG 480 ENKSNERQEV EPSSHCESQE RGSPTDAVLP RGLIEEQPNS QLAAKPEESE GICHNKVGKK 540 SNEQQQVLNT AAAVQS

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MVPCTEGSPS SSDPKTQAVT VTPVEGAAAE KPHREIKQMS PDSRAHPSQS DPEGANSCTA  60
PPKTSGGSDR DSCLVQSVQE GKSASINFER VLFPSPKGAL SSPPTHGGSA SSGKAEKASE  120
DGYNWRKYGQ KNVKGNEFIR SYYKCTHPNC LVKKQVERSL EGQITDTVYF GQHEHPKPNI  180
NIPLAVGLVV SIVEEKPEKP SSTVTEEKPS EVGGKTCHQV KTTDTPLSPT VTASNDVRSA  240
ALSSPRSRLR DEFDNDDGPS SKRKKKENRG VEAAAVDKAT GDTRLIIQTT SEVDIVNDGY  300
RWRKYGQKLV KGNPNPSGAE SCKTSPRLVL HKFLVCCIWI DFILSQSMSS LSYDFYVELR  360
WVTSLCHCRS YYRCSSPGCP VKKHVERASH DPKVVMTTYE GQHDHDMPAA RMVTRNPAGT  420
NGATIAQNDE GRIKSGEGEA VSADAAVREG NSDPPSKSTE QQTDKSENKC GRARSLNAEG  480
ENKSNERQEV EPSSHCESQE RGSPTDAVLP RGLIEEQPNS QLAAKPEESE GICHNKVGKK  540
SNEQQQVLNT AAAVQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	2e-70	WRKY family protein