PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75156.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Trihelix

Protein Properties

Length: 94aa MW: 10777.1 Da PI: 5.5686

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.4	2.1e-09	20	88	2	70
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ l L++ + ++ ++ ++ + ++W ++ ++ + + r+ +qC+ kwe+l +y +i e + + OWM75156.1 20 WSVTDSLILVNEMSTIDGDYLNALSSYQKWNVIAHNCTKLDVVRTLNQCRRKWESLLDDYGRIVEYKAQ 88 7778888899999999999999999***********************************999887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 94 aa Download sequence
MDGDACLGSR HTRSLVAPDW SVTDSLILVN EMSTIDGDYL NALSSYQKWN VIAHNCTKLD 60 VVRTLNQCRR KWESLLDDYG RIVEYKAQLS HDPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	1e-31	Trihelix family protein