PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM75036.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 28959.6 Da PI: 6.1599 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16 | 2.2e-05 | 169 | 207 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++ + L++l+ + +K + a++L++A+ YIk Lq OWM75036.1 169 RKEKLGDRVAALQQLVAPY-----GKTDTASVLTEAIGYIKFLQ 207 6667778888899999888.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MNYCNTLDPP LNCTMNINGG VSSSPCFHDQ PSKSSSESFD VTIDTLPSSN YSTEDSFLHP 60 TSHITNVVGT LLPYPNGTEH YFPIHGCPSD KLIRQTIHKS KHSVPCIPEL LSRTPTWAVP 120 SFWLDSNFPV LDFSSEAPAS SWSSFDLSDH IRQNLSAPKS LCTYPHKVRK EKLGDRVAAL 180 QQLVAPYGKT DTASVLTEAI GYIKFLQDQV EVLREDNNGS IEWKGDLRRQ GLCLVPLSCL 240 SHIDFDSCGG PIFNWTFPRV A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 7e-28 | bHLH family protein |