PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM74771.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 388aa    MW: 42822.2 Da    PI: 4.593
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM74771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-194493255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d      ++ r++lg+++taeeAa+a+++a+  l+g
  OWM74771.1 44 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 93
                789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MARKRKACEG EEQTPSNPTP EQTTSWDEMV KEAALGGMRR ARKRFVGVRQ RPSGRWVAEI  60
KDTIQKIRVW LGTYDTAEEA ARAYDEAACL LRGANTRTNF WPCSGSGTSS SPALPTKITN  120
LLLQRLRARN NSISHDCPSI LDSNSNFNEQ QNHLVQEHVA DFSEMQFTDF LNFPEENSPH  180
NNSDNKTNSS AATDNNYQTR SPECGAFDYQ SSSGDCSLGG DAVEEGEEGG TDLGAIDFRF  240
LDEVRQSDDC YYSPFKIAEE IVVVDPMGLE AEGDEDEPSI ALKRMKYYER KFSASLYAFN  300
GIPECLKLKL GSGNGGKCDQ LSKLRNACSS RKSMEEGVKP DGTAKHEEET PCKDFITGSV  360
SSASSLGSSV NEGELWSSLD LQPICFVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-19ERF family protein