PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM74531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 224aa MW: 25673.8 Da PI: 7.9515 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.9 | 4.8e-20 | 53 | 106 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq++ Lee F +++++ +++ +LA++lgL+ rqV vWFqNrRa++k OWM74531.1 53 KKRKLSTEQVTLLEESFGNEHKLESDRKDRLASELGLDPRQVAVWFQNRRARWK 106 45689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.8 | 7.2e-39 | 53 | 144 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+ls+eqv+lLEesF +e+kLe++rK +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+ ++a e++rLe+ev +L+e+l+e OWM74531.1 53 KKRKLSTEQVTLLEESFGNEHKLESDRKDRLASELGLDPRQVAVWFQNRRARWKSKKLEEEYSKLKSLHEAAIVEKCRLETEVLKLKEQLSE 144 9****************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MTNNNQIEDQ MALFSQLYPG VYTPIPPASR ESKPRRRRRK NKGGDASGLM GAKKRKLSTE 60 QVTLLEESFG NEHKLESDRK DRLASELGLD PRQVAVWFQN RRARWKSKKL EEEYSKLKSL 120 HEAAIVEKCR LETEVLKLKE QLSEAGKEIQ KLSSISSSSS SSDHQRCCDH QGFNSSNSPS 180 TSSISMDRGQ PDFLGDFGYE DDVMFYMPEN SYSVQCMEWL NLYM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 56 | RRRRRKNKGGDASGLMGAKKRK |
2 | 36 | 57 | RRRRRKNKGGDASGLMGAKKRK |
3 | 37 | 58 | RRRRRKNKGGDASGLMGAKKRK |
4 | 38 | 59 | RRRRRKNKGGDASGLMGAKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 4e-52 | HD-ZIP family protein |