PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM74213.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | NF-YC | ||||||||
Protein Properties | Length: 240aa MW: 26619 Da PI: 6.0772 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 178.3 | 7.1e-56 | 60 | 163 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql+sfw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdiv OWM74213.1 60 QLQSFWANQcqeIEHTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 158 89******99999************************************************************************************** PP NF-YC 97 prdel 101 pr++l OWM74213.1 159 PREDL 163 **986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MDPSGNGNTA QMPYGMNQYQ PNQVGSGPSP PPAQPPATSA QHQLAYQHIH QQQQQQLQQQ 60 LQSFWANQCQ EIEHTTDFKN HSLPLARIKK IMKADEDVRM ISAEAPVVFA RACEMFILEL 120 TLRSWNHTEE NKRRTLQKND IAAAITRTDI FDFLVDIVPR EDLREEVLGP VARGGLGVGG 180 AGGVPVGAPA EGVPYYMMPP PQHGAPQIGG VQALYGQQPR PYMGQPMWPQ QQQQHPADET |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 133 | 139 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-70 | NF-YC family protein |