PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM74100.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 1223aa MW: 136562 Da PI: 8.9954

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM74100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.3	7.1e-08	189	224	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e +++a +++G++ Wk++a+ + R+++++ OWM74100.1 189 EWSKEELEGFYEAYRKYGKD-WKKVAAAIR-YRSAEMV 224 7***************99.*****99.9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1223 aa Download sequence
MPERYLVSTC PSKTVMMEGI PCRIFSLALS SLGPLAMSSG GTVVGDVEVF NDLETRVEGE 60 GNQLWLLVNI AHGLKGPRQS WIVDGRRWPH HPLYLSLIDC IVIYESWPTV TWLRHEIDFE 120 SSLASHGCRR VRALAVVGAG KLPMAPSRKS RSINRRIPFA NEVPWEKAEG DANKNCQRKR 180 KLSDMLGPEW SKEELEGFYE AYRKYGKDWK KVAAAIRYRS AEMVEALFSM NRAYLSLPEG 240 TASVVGLVAM MTDHYAMMGR SDNEQDSSDG EGASRKPQKC TRAKLLQNNS KKIDRNLPDL 300 QKLNSDVPSD GCLSLLKKRR SGSETPVVGR RTPRIPVSYS HDRDFGARLC SPNKQAFKQK 360 INANDDYDVA HEVAVALTEA SQRGGSPNLS QTPKGKSAKA KASPIRNGNG MHAGSQSSSA 420 KPHDSEFEGG CELSLGSSEG TGIVVLNKGK KQPKKMLEVK ESAHYDDIKE ACSGTEEGER 480 GNVFKKKLEN RVSRTKNARS PSKGLRKKSK KILFGEDRDS TFDALQTLAD LSLMMPASTV 540 DSNLPVQIKE EREKTDTVEQ SKRKGNLSVP TEFNCPGTSE TIKAIGCETN AVDELKEEVH 600 SNAGIPKRKQ RSSPFRIPKA NASLDSRRTD SQKIEASKTK GESSSQHTSQ SRQQKMKKTP 660 ECTTSSTDLK MDSNEVHSTS VMNFNKVKRR SNPGLKKNSQ RDNKFLENFK RDQLKISTHW 720 FHDTEEKLHH FLSKYQARRW CIFEWFYSAI DYPWFARREF AEYLDHVGLG HVPCLTRVEW 780 GVIRSSLGKP RRFSKHFLEE EREKLVQHRK TVRKHHTSFR SGTLEVLPSD LPQPLFTGQR 840 VIVIHPKSRE IHGGYVLTVE HSSCLIQFEQ LELGIHWVKD IDCMPLTLLE NIPESPARSI 900 HTSKKLNENS SGPCLSAQMK NLMMDQSLEL PTTKRQDEMN GLSHSTTSTV EIIKTSKLPE 960 VTLGLSHSEN ATLLQASNSQ ASDSEQIQAR EADILALSEL TRALDKKEAV LLELRRMNDE 1020 VSEYQKDGVD CLKDSEPFTK TYAATLLQRG DFGPRVSHII ESSRTKAREM VVAALQAASS 1080 LFKDAKGLDG FEEAVDFVNN QLAAQDFLLS NSVLINSESQ DQMAASRSPN PGASHGPVLK 1140 LTDSLDENSR KIPSELIASC VATLLIIQNC TERQFPPAEV AQIIDSAVKS LKPLCSQNLP 1200 IYTEIQKCMG MIRNQILGLI PTS

Sequence ? help Back to Top

Protein Sequence Length: 1223 aa Download sequence

MPERYLVSTC PSKTVMMEGI PCRIFSLALS SLGPLAMSSG GTVVGDVEVF NDLETRVEGE  60
GNQLWLLVNI AHGLKGPRQS WIVDGRRWPH HPLYLSLIDC IVIYESWPTV TWLRHEIDFE  120
SSLASHGCRR VRALAVVGAG KLPMAPSRKS RSINRRIPFA NEVPWEKAEG DANKNCQRKR  180
KLSDMLGPEW SKEELEGFYE AYRKYGKDWK KVAAAIRYRS AEMVEALFSM NRAYLSLPEG  240
TASVVGLVAM MTDHYAMMGR SDNEQDSSDG EGASRKPQKC TRAKLLQNNS KKIDRNLPDL  300
QKLNSDVPSD GCLSLLKKRR SGSETPVVGR RTPRIPVSYS HDRDFGARLC SPNKQAFKQK  360
INANDDYDVA HEVAVALTEA SQRGGSPNLS QTPKGKSAKA KASPIRNGNG MHAGSQSSSA  420
KPHDSEFEGG CELSLGSSEG TGIVVLNKGK KQPKKMLEVK ESAHYDDIKE ACSGTEEGER  480
GNVFKKKLEN RVSRTKNARS PSKGLRKKSK KILFGEDRDS TFDALQTLAD LSLMMPASTV  540
DSNLPVQIKE EREKTDTVEQ SKRKGNLSVP TEFNCPGTSE TIKAIGCETN AVDELKEEVH  600
SNAGIPKRKQ RSSPFRIPKA NASLDSRRTD SQKIEASKTK GESSSQHTSQ SRQQKMKKTP  660
ECTTSSTDLK MDSNEVHSTS VMNFNKVKRR SNPGLKKNSQ RDNKFLENFK RDQLKISTHW  720
FHDTEEKLHH FLSKYQARRW CIFEWFYSAI DYPWFARREF AEYLDHVGLG HVPCLTRVEW  780
GVIRSSLGKP RRFSKHFLEE EREKLVQHRK TVRKHHTSFR SGTLEVLPSD LPQPLFTGQR  840
VIVIHPKSRE IHGGYVLTVE HSSCLIQFEQ LELGIHWVKD IDCMPLTLLE NIPESPARSI  900
HTSKKLNENS SGPCLSAQMK NLMMDQSLEL PTTKRQDEMN GLSHSTTSTV EIIKTSKLPE  960
VTLGLSHSEN ATLLQASNSQ ASDSEQIQAR EADILALSEL TRALDKKEAV LLELRRMNDE  1020
VSEYQKDGVD CLKDSEPFTK TYAATLLQRG DFGPRVSHII ESSRTKAREM VVAALQAASS  1080
LFKDAKGLDG FEEAVDFVNN QLAAQDFLLS NSVLINSESQ DQMAASRSPN PGASHGPVLK  1140
LTDSLDENSR KIPSELIASC VATLLIIQNC TERQFPPAEV AQIIDSAVKS LKPLCSQNLP  1200
IYTEIQKCMG MIRNQILGLI PTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein