PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73961.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 98aa    MW: 10997.3 Da    PI: 9.5622
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.73.2e-0628641854
                HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +  ++Lr++lP+ +   +s K+s + +L++++++I+ L
  OWM73961.1 28 ELVSKLRQVLPEiR-ERRSDKVSASKVLQETCNHIRRL 64
                56689*******77.99*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MSGSRRSSSR SRQQSSGSSS ISDDQIIELV SKLRQVLPEI RERRSDKVSA SKVLQETCNH  60
IRRLNREVDD LSERLSQLLT TIDADSAEAA IIRSLITQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39860.12e-32bHLH family protein