PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73955.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ZF-HD
Protein Properties Length: 289aa    MW: 30861.6 Da    PI: 8.7751
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer109.91.4e-3452109359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v+Y+eClkNhAaslGgha+DGCgEfmps++++ +++++lkCaACgCHRnFHRr++++
   OWM73955.1  52 VVTYRECLKNHAASLGGHALDGCGEFMPSPSATfSDPTSLKCAACGCHRNFHRRDPDD 109
                  589***************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MEITSTAAHA SKSPEPIPDT PIRIQPAKPV TPCTNGVLKR HRQQATPAAA VVVTYRECLK  60
NHAASLGGHA LDGCGEFMPS PSATFSDPTS LKCAACGCHR NFHRRDPDDS SPPPLPSATH  120
AIEYHPHHRH HPPPPRSPSS ASPPPISSSY APHMLLALSS GLPSGPEKPP PVAPHPTAMI  180
SPNPGSRKRF RTKFSQTQKD RMLEFAEQVG WKIQKRDEDL IQEFCSEVGV DRNVLKVWMH  240
NNKSTFGKRE TNQNTGHGSA GGGGGGNGCG GESHMAEPHM GTNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.14e-52ZF-HD family protein