PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM73894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 24349.4 Da PI: 6.6832 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.7 | 6.7e-19 | 75 | 126 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+GVr ++ +g+++AeIrd + + r++lg+f+t+e Aa a+++a+ +++g+ OWM73894.1 75 SYRGVRKRP-WGKYAAEIRDSTR---HgVRVWLGTFDTPEAAALAYDQAAFSMRGA 126 69*******.**********422...25*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MYKKSPSVSW DELLFNHGSL PFDVHDSEEM LLLDVISRGA TESSESESSS VPKEEEVTST 60 SDFVQNGDDP RKEKSYRGVR KRPWGKYAAE IRDSTRHGVR VWLGTFDTPE AAALAYDQAA 120 FSMRGAMAVL NFPLERVKES LREMKYKVEE GCSPVVALKR RHCMRRKSQS RKNKPKESLS 180 KPVKAENVVV FEDLGPDYLE ELLSSSESSA HTCPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-64 | ERF family protein |