PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73841.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HB-other

Protein Properties

Length: 1079aa MW: 121750 Da PI: 6.8829

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73841.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	35.1	2.3e-11	53	103	7	57
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t+ q+++Le+++ ++ p+ +++ee A lgLt +qV+ WF +R ++kk OWM73841.1 53 KTPLQVQALEDFYSDDKCPTPRAMEEYAVALGLTLKQVQQWFSEKRRRDKK 103 5899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1079 aa Download sequence
MTVLLPGASE ELLSQSCADT GSEFAAAATG SFALPHVLML SPWEAGSMVT KRKTPLQVQA 60 LEDFYSDDKC PTPRAMEEYA VALGLTLKQV QQWFSEKRRR DKKGNEIDSL PCSSKEALVS 120 RRKDRRIAKA KRLKRPICLQ DMLFTPEYIM QKVFRKDGPP LGIEFDSLPA RAFNSNAGSC 180 EDLAFHETLH KTRKRKKQRR LRDKLLEKKK PIRKKKKRNQ DSFLKPPPKE KCKLALESVT 240 TQEHVDLFAV RVDDEELELR ESRTGPNPLS SCDHLASDAL RGCSLCKDLL PKFPPISVKM 300 KKPFSIQPWD SSLEMVKKLF KAFHFLYTYS VMLDINSFTL DEFAQAFHDK DSLLLGKIHV 360 ALLELLFVDI DLELSGGPLH HSSKSCKFLA LIHSVENQEI VVEFWKKFLN PLTWPEVLRQ 420 VSVAAGFGSN QGSLQREVID EELNRMRKYG LHPGTLKGEL FRLLLQQGNN GLKVSEMARS 480 PQIAELNISS TTEELENSIC SSLSSDIALF EKISSSTYRL RVNFGSKDDG DCHSDTEDSG 540 TIDDQHDESG LCSSGNNSEC ESESPSYRKS KHMNHYKRRN SMLFVNGEID ESNPGEPWLL 600 GLMEGEYSDL SIEEKLNALE ALIDLLRAGS SIRMEDPTIA MAENAAPAIY CGSGGKIKRP 660 SANQWNVTRP SWVYESNRGG RTNQSSHETH PVDSKEVMSK LCTSGKTLGS RKGTDLAEDI 720 HPMQSVFLGS DRRYNRYWLF LGPCDEYDPG HKRVYFESSE DGHWEVIDTE EAFCALLSVL 780 DERGAREGPL IDSLDKRKVF ICQAMLTGVK HTEVMSVSSS CQSELDMGTE ANSSPISDVD 840 NCLNLTVAIG DSMPLPGAIV LENGKKTEEQ KRRWSRLKAF DAWTWNTYLE LNCVKLGKRS 900 FIDSLVKCER CHDLYWRDEK HCKICHTTFE LDFELEERYA IHAATCTEKD VNVFPKHKIL 960 SSRLQSLKAA VHTIESIMPE GSLIGAWSKS AHRLWVKRLR RTSTVAELLQ VLADFVGAIN 1020 RDWLFQCDSM RNLDIVGAEM VALFPMIPQT SSAVALWLVK LDVLLANYIQ GANSNRNQQ

Sequence ? help Back to Top

Protein Sequence Length: 1079 aa Download sequence

MTVLLPGASE ELLSQSCADT GSEFAAAATG SFALPHVLML SPWEAGSMVT KRKTPLQVQA  60
LEDFYSDDKC PTPRAMEEYA VALGLTLKQV QQWFSEKRRR DKKGNEIDSL PCSSKEALVS  120
RRKDRRIAKA KRLKRPICLQ DMLFTPEYIM QKVFRKDGPP LGIEFDSLPA RAFNSNAGSC  180
EDLAFHETLH KTRKRKKQRR LRDKLLEKKK PIRKKKKRNQ DSFLKPPPKE KCKLALESVT  240
TQEHVDLFAV RVDDEELELR ESRTGPNPLS SCDHLASDAL RGCSLCKDLL PKFPPISVKM  300
KKPFSIQPWD SSLEMVKKLF KAFHFLYTYS VMLDINSFTL DEFAQAFHDK DSLLLGKIHV  360
ALLELLFVDI DLELSGGPLH HSSKSCKFLA LIHSVENQEI VVEFWKKFLN PLTWPEVLRQ  420
VSVAAGFGSN QGSLQREVID EELNRMRKYG LHPGTLKGEL FRLLLQQGNN GLKVSEMARS  480
PQIAELNISS TTEELENSIC SSLSSDIALF EKISSSTYRL RVNFGSKDDG DCHSDTEDSG  540
TIDDQHDESG LCSSGNNSEC ESESPSYRKS KHMNHYKRRN SMLFVNGEID ESNPGEPWLL  600
GLMEGEYSDL SIEEKLNALE ALIDLLRAGS SIRMEDPTIA MAENAAPAIY CGSGGKIKRP  660
SANQWNVTRP SWVYESNRGG RTNQSSHETH PVDSKEVMSK LCTSGKTLGS RKGTDLAEDI  720
HPMQSVFLGS DRRYNRYWLF LGPCDEYDPG HKRVYFESSE DGHWEVIDTE EAFCALLSVL  780
DERGAREGPL IDSLDKRKVF ICQAMLTGVK HTEVMSVSSS CQSELDMGTE ANSSPISDVD  840
NCLNLTVAIG DSMPLPGAIV LENGKKTEEQ KRRWSRLKAF DAWTWNTYLE LNCVKLGKRS  900
FIDSLVKCER CHDLYWRDEK HCKICHTTFE LDFELEERYA IHAATCTEKD VNVFPKHKIL  960
SSRLQSLKAA VHTIESIMPE GSLIGAWSKS AHRLWVKRLR RTSTVAELLQ VLADFVGAIN  1020
RDWLFQCDSM RNLDIVGAEM VALFPMIPQT SSAVALWLVK LDVLLANYIQ GANSNRNQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	193	197	RKRKK
2	193	199	RKRKKQR
3	193	210	RKRKKQRRLRDKLLEKKK
4	193	216	RKRKKQRRLRDKLLEKKKPIRKKK
5	194	215	KRKKQRRLRDKLLEKKKPIRKK
6	194	217	KRKKQRRLRDKLLEKKKPIRKKKK
7	194	217	RKRKKQRRLRDKLLEKKKPIRKKK
8	195	218	RKRKKQRRLRDKLLEKKKPIRKKK
9	213	218	RKKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	4e-97	HB-other family protein