PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73745.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 334aa    MW: 37263 Da    PI: 5.028
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.22e-10149191855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ErrRR r+++++  Lr l+P+      +K++Ka+i+  Av Y+++Lq
  OWM73745.1 149 SERRRRGRMKEKLYALRALVPNI-----TKMDKASIVGDAVLYVQDLQ 191
                 6*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDRFDDTSGH LLMHWNDFVL PDYIEHGADF DPFAALVPEE TLPMHGTVSG PGYIDGVRVD  60
SQFGPVPEDM FGVNDPRFEN TNFVLNGLPG GFEEDMKNGE EDGVDDDDEE EDYSSATTTT  120
ANTTSATTTS SPRTPTKKTK PDRSRTLVSE RRRRGRMKEK LYALRALVPN ITKMDKASIV  180
GDAVLYVQDL QMQAKKLKAE IAGLEASLAR PQKLHQGQPE MRSKNIHQAP RSTIPTPRKI  240
LQMDMFQVEE RGFYVRLVCN KGVGVAVALY KALEALTSFN VQSSNLASSS FSDRFILTLT  300
LNIKEGEPDM NLQNLRLWIT GSLLNRGFEL IQTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.18e-67bHLH family protein