PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73618.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

E2F/DP

Protein Properties

Length: 414aa MW: 45544.7 Da PI: 4.7095

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.7	6.4e-26	138	203	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e g+++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn i+wkg OWM73618.1 138 RYDSSLGLLTKKFVNLLKHTEGGTLDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKNFKNVIQWKG 203 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MSDPSGSDVN RLFQPQLPPP PPPPSRRQLP FSSTKPPFAR PGEYRRFAAE ESSQQPDAIV 60 VKTPVKRKNS VLDKSAEFNE IPSVSGHVDL VNRALHTPVS GKSTKTNRSY RSKAGSQTPN 120 ANVGSPSGNN QTPTGPCRYD SSLGLLTKKF VNLLKHTEGG TLDLNKAAET LEVQKRRIYD 180 ITNVLEGIGL IEKNFKNVIQ WKGYEASSSG KVDESFERLQ EEINSLSIQE SKLDNSIRFL 240 FVTEEDIQSL PSLRNETLIA VKAPHGTTLE VPDPDEAVDY PQRRYRMILR STLGPIDVYL 300 VSKFEEKFEE INGDETTSEV PASAPLSTED PSTATRSDES RGKEIDVQAL DANGQHPDVG 360 PSSDGPGGIT KIVPTSDDVD ADYWLLSGAD FSITDMWMDC ILQNGEFALF SFPC

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MSDPSGSDVN RLFQPQLPPP PPPPSRRQLP FSSTKPPFAR PGEYRRFAAE ESSQQPDAIV  60
VKTPVKRKNS VLDKSAEFNE IPSVSGHVDL VNRALHTPVS GKSTKTNRSY RSKAGSQTPN  120
ANVGSPSGNN QTPTGPCRYD SSLGLLTKKF VNLLKHTEGG TLDLNKAAET LEVQKRRIYD  180
ITNVLEGIGL IEKNFKNVIQ WKGYEASSSG KVDESFERLQ EEINSLSIQE SKLDNSIRFL  240
FVTEEDIQSL PSLRNETLIA VKAPHGTTLE VPDPDEAVDY PQRRYRMILR STLGPIDVYL  300
VSKFEEKFEE INGDETTSEV PASAPLSTED PSTATRSDES RGKEIDVQAL DANGQHPDVG  360
PSSDGPGGIT KIVPTSDDVD ADYWLLSGAD FSITDMWMDC ILQNGEFALF SFPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-112	E2F/DP family protein