PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73528.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HB-other

Protein Properties

Length: 469aa MW: 53181.6 Da PI: 9.1063

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.7	1.3e-20	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t++q+++Le+++++n+yp++e++ e+A++lgLte+qV+ WF+ rR k+k+ OWM73528.1 20 QKRRLKTPDQVKALEKFYNENKYPTEEMKSEIAEQLGLTEKQVSGWFCHRRLKDKR 75 689999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MEESKEIHSG ERKASSEKNQ KRRLKTPDQV KALEKFYNEN KYPTEEMKSE IAEQLGLTEK 60 QVSGWFCHRR LKDKRVKQEA LANGRQDHSS GIIQDLGSGH RQDSCGSTKQ GDHWPVEPRE 120 VESRSFHHHN APAAFISDEP RGNYAGNVGD MDDASSGSSS HSQERLYSAG TSLKNVNVPK 180 YLTHNGINAT SDARNIFSMG GYKPSGYLKV KCDSENAAIT AVRRQLGRLY REDGPPLGIE 240 FDPLPPGAFE FPIRDESPGS YYGGDRTYSP DTDRLWRPTS VTTRDSLYDQ RISSKISPKE 300 GANFSRTNSH DFEDYQSIPN LREKHSLFRQ PVQFSSLDPS SDMLEDSGDH VSAYSRKRNY 360 RLNSRDKEEM GTSVYNQYDG GSNSDKRGLR SFNPGNIQVG PTSRSASLKK KGQVREEKDE 420 KQYYDKKAAS DYYDLVKVKK HPTREIPMAK RVRKEFPLQD YAGEASMYR

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MEESKEIHSG ERKASSEKNQ KRRLKTPDQV KALEKFYNEN KYPTEEMKSE IAEQLGLTEK  60
QVSGWFCHRR LKDKRVKQEA LANGRQDHSS GIIQDLGSGH RQDSCGSTKQ GDHWPVEPRE  120
VESRSFHHHN APAAFISDEP RGNYAGNVGD MDDASSGSSS HSQERLYSAG TSLKNVNVPK  180
YLTHNGINAT SDARNIFSMG GYKPSGYLKV KCDSENAAIT AVRRQLGRLY REDGPPLGIE  240
FDPLPPGAFE FPIRDESPGS YYGGDRTYSP DTDRLWRPTS VTTRDSLYDQ RISSKISPKE  300
GANFSRTNSH DFEDYQSIPN LREKHSLFRQ PVQFSSLDPS SDMLEDSGDH VSAYSRKRNY  360
RLNSRDKEEM GTSVYNQYDG GSNSDKRGLR SFNPGNIQVG PTSRSASLKK KGQVREEKDE  420
KQYYDKKAAS DYYDLVKVKK HPTREIPMAK RVRKEFPLQD YAGEASMYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	4e-77	HB-other family protein