PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73393.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 291aa    MW: 31950.8 Da    PI: 8.6743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73393.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-174292155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++ GVr+++ +g+Wv eI+d +   ++ r +lg+f+taeeAa+a+++a+  l+g
  OWM73393.1 42 TKFVGVRQRP-SGKWVGEIKDTT---QKIRMWLGTFDTAEEAARAYDEAACLLRG 92
                699*******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MEIQFHRQQE GSRVSLSPNK RSSGSLGKSK GPSGMGMNSA RTKFVGVRQR PSGKWVGEIK  60
DTTQKIRMWL GTFDTAEEAA RAYDEAACLL RGSNTRTNFS NRSAPINSAL SIKIRKLLNH  120
KLSLKKKPIP VPDSTVPPSS VVLTSSPTSS NSYNCNGSGV NSPSSGIRSQ DAQMFSSDAY  180
RPDLSYCTGI YEPNISQNDY SWAVMPGFSY GYPITLIQEA EEVLRQDSLF AGAGEAAELS  240
EFDRMKVERQ ISASLYAMNG LNECLDKSYN NLDEAPSLWD LPTLSRLFCQ G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-43ERF family protein