PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73258.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 1010aa MW: 110916 Da PI: 5.731

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73258.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.8	3e-16	339	385	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRd+iN+++ L+el+P++ K +Ka++L +A+eY+ksLq OWM73258.1 339 VHNQSERRRRDKINKKMRALQELIPHC-----NKTDKASMLDEAIEYLKSLQ 385 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1010 aa Download sequence
MNPCLPDWNF ESDLPFTNQN KPSGPNNDLV ELLWRNGQVV MHSQTHRRPS PDHLETRQLP 60 QKHENQHHQN PTQRAGVGGN TNMSYGNSSI LIQDDETVSW IHYPVDDSFE KEFCSPFFTE 120 LPAADAMETD KLILAAPEQA SNRQSFDPDS SRVPNPMLPP QPQVQFPDSA VQKNHGSAKV 180 NFSQFLGPIK GDLRHSNPHF GGAGDVGECS GMTVGSSNCG SNQVVLNDPD FSRASSNGTG 240 TVGLCSQLFA EDNIPKTVPQ DEGRKTETLE PTVTSSSGGS GSSFGGTQKN SAGTSSLKRK 300 GRDVEDSECQ SDAAELESGG GKKPSQRSGS ARRSRAAEVH NQSERRRRDK INKKMRALQE 360 LIPHCNKTDK ASMLDEAIEY LKSLQLQLQM MWMGSGMAAP MMFPGMQPYM SPMGIGMGPH 420 PLAAVHNNMH LPRVPMVDHQ STSMAPPNQN MMCQAPVLNP VNFQNQMQMQ NLPEQFVRYM 480 GMHQLQAAAS QPVNMFRFGP QTMQNSQVTA VPGTGIVQLG GGASNDDASR GKIAECYSTE 540 RKRGRTPSVI VLGAGIAGLA AARSLHNASF QVTVLESRDR IGGRINTDYS LGFPIDLGAS 600 WLHGVCKENP LAPLVGRLGL PLYRTCGDDS VLFDHDLESY ALYDADGKQV PQELVTEVGQ 660 AFEEILKETN ELREELEEDI SMQQAIASVL ERRPDLRFEG LANKVLQWYL CRMEGWFAAD 720 ADTISARCWD EEELLPGGHG LMVRGYLPVV NTLAKGLDIR LGHRVTDIIK RSNGVNVTVE 780 GGKTFSADAA VITIPLGVLK SHTIRFEPKL PDWKEKAISE IGLGVENKIV LHFGEVFWPN 840 VEFLGVVADT SYVCSYFLNL HKATGHSVLV YMPAGQLARD IEKMSDEAAA SFAFSQLKKI 900 LPDASPPIQY LVSHWGTDAN SLGSYSYDLV GRSHDLYEWL RAPIDNLFFA GEATSVSFPG 960 SAHGAYSTGL MAAEECRMRV LERYGELDRL NPLIYEEASQ IMVPLQISRL

Sequence ? help Back to Top

Protein Sequence Length: 1010 aa Download sequence

MNPCLPDWNF ESDLPFTNQN KPSGPNNDLV ELLWRNGQVV MHSQTHRRPS PDHLETRQLP  60
QKHENQHHQN PTQRAGVGGN TNMSYGNSSI LIQDDETVSW IHYPVDDSFE KEFCSPFFTE  120
LPAADAMETD KLILAAPEQA SNRQSFDPDS SRVPNPMLPP QPQVQFPDSA VQKNHGSAKV  180
NFSQFLGPIK GDLRHSNPHF GGAGDVGECS GMTVGSSNCG SNQVVLNDPD FSRASSNGTG  240
TVGLCSQLFA EDNIPKTVPQ DEGRKTETLE PTVTSSSGGS GSSFGGTQKN SAGTSSLKRK  300
GRDVEDSECQ SDAAELESGG GKKPSQRSGS ARRSRAAEVH NQSERRRRDK INKKMRALQE  360
LIPHCNKTDK ASMLDEAIEY LKSLQLQLQM MWMGSGMAAP MMFPGMQPYM SPMGIGMGPH  420
PLAAVHNNMH LPRVPMVDHQ STSMAPPNQN MMCQAPVLNP VNFQNQMQMQ NLPEQFVRYM  480
GMHQLQAAAS QPVNMFRFGP QTMQNSQVTA VPGTGIVQLG GGASNDDASR GKIAECYSTE  540
RKRGRTPSVI VLGAGIAGLA AARSLHNASF QVTVLESRDR IGGRINTDYS LGFPIDLGAS  600
WLHGVCKENP LAPLVGRLGL PLYRTCGDDS VLFDHDLESY ALYDADGKQV PQELVTEVGQ  660
AFEEILKETN ELREELEEDI SMQQAIASVL ERRPDLRFEG LANKVLQWYL CRMEGWFAAD  720
ADTISARCWD EEELLPGGHG LMVRGYLPVV NTLAKGLDIR LGHRVTDIIK RSNGVNVTVE  780
GGKTFSADAA VITIPLGVLK SHTIRFEPKL PDWKEKAISE IGLGVENKIV LHFGEVFWPN  840
VEFLGVVADT SYVCSYFLNL HKATGHSVLV YMPAGQLARD IEKMSDEAAA SFAFSQLKKI  900
LPDASPPIQY LVSHWGTDAN SLGSYSYDLV GRSHDLYEWL RAPIDNLFFA GEATSVSFPG  960
SAHGAYSTGL MAAEECRMRV LERYGELDRL NPLIYEEASQ IMVPLQISRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	344	349	ERRRRD
2	345	350	RRRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	1e-48	bHLH family protein