PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM73210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 278aa MW: 30596.1 Da PI: 6.3637 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.6e-19 | 39 | 88 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +grWvAeI+d + ++ r +lg++ taeeAa+a+++a++ l+g OWM73210.1 39 KYVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTYETAEEAARAYDQAARLLRG 88 8********.7*********32...35***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MEIHFQQQNS NIPILSSKIN KFKGPRNRNG GGSGGNNNKY VGVRQRPSGR WVAEIKDTTQ 60 KIRMWLGTYE TAEEAARAYD QAARLLRGSN TRTNFRAHTP SDSRLASRIR SLLNNKRGIM 120 PDSTPQGNVT DVANVNVAAT PTTSVSDNMI LFSSHSTSSS TTSCASTEDV YRPDLSHCIE 180 EFALGSSHDV PGPRIDRFSY TQEVLEVPRI CASSGDQTQA AADMEEFSEF ERMKFERQIS 240 ASLYAVSGVE ELMGTLVNDP SEAIWDLPPL CSLASLLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 3e-26 | ERF family protein |