PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72981.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 285aa    MW: 31986.4 Da    PI: 5.04
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.34.9e-3183141259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY+ eHnh+
  OWM72981.1  83 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRDDPTMLIITYSCEHNHP 141
                 69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MEGRFRRGSS FRTELEDDGI SQTPEPENLT ESPRSSGAFG DVMRLPSTSS PKRSRRSIQK  60
RVISIPIKEP EGSRLKGEGA PPSDSWAWRK YGQKPIKGSP YPRGYYRCSS SKGCPARKQV  120
ERSRDDPTML IITYSCEHNH PWPAPRNGHH HHNHHNVAAA NAAMDDAPNK PEADVSSPDP  180
EPEQDHEPEA EPDPAKNKFT DIKEESPDLM LINDEFGWFT GMETTTSSLL ETPFFDSKAV  240
GVDADMAMFF PMREEDESLY ADLGELPECS VVFRHRDVGT EVQIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-80WRKY family protein