PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72815.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 316aa    MW: 32976.2 Da    PI: 7.0258
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-11163208555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h+++Er RR +i +++  L+el+P+a      K +Ka++L + +eY+k Lq
  OWM72815.1 163 HSIAERLRRVKISERMKALQELVPNA-----NKTDKASMLDEIIEYVKFLQ 208
                 99***********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MQPRDIKEET RSMMNSLLLD PSMIRHNFPD HHLDLQAPPA FGPTHPALVD NFLDHLLASL  60
PSGQWPDLAA ASTVQLAGDA GATATDQPHI LLLDGAAREF LDGGNGAVGG DPSSFNCLPQ  120
GQAEGNFASK SPAPSGLPAG GGAAAAQPKK KIRARRGQAT DPHSIAERLR RVKISERMKA  180
LQELVPNANK TDKASMLDEI IEYVKFLQVQ VKLLSMSRLG GASGAVAPFP ADISSQHRGG  240
GPTIGPHLNG DQTARPSDSS PNATEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLAATIS  300
TTAGSRGTAV SSGGSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58010.13e-66bHLH family protein