PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72704.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 310aa    MW: 34269.7 Da    PI: 8.0446
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1079.7e-34158215259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+
  OWM72704.1 158 EDGYRWRKYGQKAVKHSPYPRSYYRCTTQKCTVKKRVERSFQDPSIVITTYEGQHNHP 215
                 8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MSNEPRDLYN NYDDPFQVNY QYGNFGSEPS PYLSFTDCLR GSTDYNSLAR AFGISPSSSE  60
VVSPVDGNPR PVFDAGEIRG PGSESNNNPA TPNSSISSSS TEAGAEEDSS KSKREVQAKD  120
GEGGESSKKL NKLKKKGEKR EREPRFAFMT KSEVDHLEDG YRWRKYGQKA VKHSPYPRSY  180
YRCTTQKCTV KKRVERSFQD PSIVITTYEG QHNHPIPATL RGNSAAGMFA SSMLNPNPAT  240
GGMGASFPHE LLLQMRTPSV SHPGSGGAGG DSSLYQQTLN SPQQQQYQQQ FPDYGLLQDM  300
VPSIYFKKEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.13e-58WRKY family protein