PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72132.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 319aa    MW: 35262.9 Da    PI: 5.0283
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72132.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-18115164255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+W+AeIrdp     r  r +lg++ taeeAa  +++a+ +l+g
  OWM72132.1 115 KFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYETAEEAALVYDHAAIQLRG 164
                 89*******.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
METRSLPSGV KFSEHRTHSK MTVLGSSEDT NTSYRPEIRP RVVRVSFTDP DATDSSSDEE  60
ADTTPRRRLK KYVHEIAIEP CSSKPAMARP PRKRANGKSN ISASRLEMKA APGRKFRGVR  120
QRPWGKWAAE IRDPLRRVRL WLGTYETAEE AALVYDHAAI QLRGPDALTN FTSPPQKAAE  180
KGPVSSPTSV LRPLSPEPTE SQSHSTNDTP KEARESSCSS ENNISNYSCS SENFSDYSSL  240
DSLVPPADIF DFHFEDSFPS LFEDSGFGES FLGDNLGDLF MNPAEDFGFG FGLGSSGWNM  300
DDHFPDIGDI FGSDPLLAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-51ERF family protein