PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72088.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 324aa    MW: 35697.8 Da    PI: 4.751
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.2e-31153211259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs+fprsYYrC+s  gC ++k+vers+++p ++++tY+geH h+
  OWM72088.1 153 SDLWAWRKYGQKPIKGSPFPRSYYRCSSMkGCLARKQVERSSSEPGMFTVTYTGEHSHT 211
                 799***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MAGEFVRRDD WDLDAVVTGR MNQASSTPCD IKEWFDLFID DDPLMRMSNT GWELPPDDFP  60
TGFYETMTMS KVLDDLEGLY DHPVMLPASS EAIEVGSSGN TAETSEGAQQ LQEGAGSSAL  120
ADVDVVRATA KYKRRKNQHK QVVQHVTSDG LSSDLWAWRK YGQKPIKGSP FPRSYYRCSS  180
MKGCLARKQV ERSSSEPGMF TVTYTGEHSH TQPTRRSALA GISRPSKFST SKKSSTAATT  240
DEFARSMPKL PQGMSINNHE SSPTSTSTME DGPCACKAET TFLWGESENV DKTLNLPSLV  300
LGEEIFMGFD ELEGLGIDFA LTGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.13e-44WRKY family protein