PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71988.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 266aa    MW: 28341.6 Da    PI: 4.9587
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.55.3e-16100148255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ++G+r ++ +g+Wv+eIr+p++   ++r++lg+f tae+Aa+a++ a+++l+g
  OWM71988.1 100 SFRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPTAEMAAAAYDVAALALKG 148
                 69***9.55.6*********843...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MSDPHTPSSE AHVDQPPPPQ PSQPPPPPPR PALEPPQPPL TSTPLPRTLP PLDLQSPRSL  60
VVETPSPTSS GGGRNPSPRQ QQMSPRTGPG SASPTGRHPS FRGIRCRSGK WVSEIREPRK  120
TTRIWLGTFP TAEMAAAAYD VAALALKGGD AILNFPHLMK SYPVPASTAP ADIRRAAAAA  180
AASRKAEAGG DDSPPESGQT SNEVTNIVQE STASKQEEFV DEEALFDMPN LLVDMAEGMM  240
VSPPRMNSPP SNDSPDNSDL ETLWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-32ERF family protein