PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM71987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25845.4 Da PI: 4.6684 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.2e-17 | 64 | 114 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +++Wv+e+r+p + + r++lg++ tae+Aa+a++ a+++l+g OWM71987.1 64 PVYRGVRRRN-NNKWVCELREPAK---QSRIWLGTYPTAEMAARAHDVAALALRG 114 68*****887.8*********833...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MDFFGHYFDP KPYESEYNPS MPESSTFPDS CTSRRSHSDE EHLLASSRPK KRAGRVVFKE 60 TRHPVYRGVR RRNNNKWVCE LREPAKQSRI WLGTYPTAEM AARAHDVAAL ALRGSSACLN 120 FADSAWRLPV PASTDPADIR RTAAEAANAF RPDKLEDAPG DGADAGNEEE EAAGGQGSEG 180 VVDAIPSSFG AGDGTWDMEG WLEGPLLSPP HGPGSGVQVG WEEPEPDAEV SLWSFSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12610.1 | 5e-51 | ERF family protein |