PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM71986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 21849.3 Da PI: 5.1216 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.4 | 2.6e-16 | 26 | 75 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 + y+GVr++ +++Wv+e+r+ + k+ r++lg++ ta++Aa+a++ a+++l+ OWM71986.1 26 PVYRGVRRRN-NNKWVCELRE----QaKQSRIWLGTYPTAKMAARAHDVAALALR 75 68*****887.8******999....5567***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MISLHDLSFH HLLGRGRVVF KETRHPVYRG VRRRNNNKWV CELREQAKQS RIWLGTYPTA 60 KMAARAHDVA ALALRSLSAC LNFADSAWRL PVPASTDPAD IRRAAAEAAN AFRPDKLEDA 120 PGDGTGARNK EEEAAGGQGS EEVVDAIPSS SWAGDGTWDM EGWLEGPLLS PPHGPDSGIQ 180 VEWEEPEPDA EVSLWSFSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12610.1 | 3e-33 | ERF family protein |