PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM71983.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 198aa MW: 21741.1 Da PI: 12.0361 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.3 | 7.9e-18 | 44 | 94 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +++Wv+e+r+p + + r++lg++ tae+Aa+a++ a+++l+g OWM71983.1 44 PVYRGVRRRN-NNKWVCELREPAK---QSRIWLGTYPTAEMAARAHDVAALALRG 94 68*****887.8*********833...5*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 198 aa Download sequence |
MPESSTFPDS CTPYRYHSDE EHMLASSRPK KRTGRVVFKE TRHPVYRGVR RRNNNKWVCE 60 LREPAKQSRI WLGTYPTAEM AARAHDVAAL ALRGRSACLN FADSAWLLPV PASTDPSTSA 120 ALLLRPRTPS APTSSRTPRG MVPVQAMRKR RRPGAKGARK LLMLSQAVPG RAMGPGTWKA 180 GSKGRSSPRP TAPAAASK |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 148 | 152 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G12610.1 | 2e-44 | ERF family protein |