PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM71471.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 272aa MW: 31134.1 Da PI: 5.6666 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.3 | 4.2e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + G+++W+++++ g+ R++k+c++rw +yl OWM71471.1 14 RGPWTIEEDHKLMSFILNNGTHCWRSVPKLAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 58 | 2.1e-18 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T++E++++++++++lG++ W++Ia++++ gRt++++k++w++ OWM71471.1 67 RGGFTEDEEDQIIELHARLGNR-WSKIASHFP-GRTDNEIKNHWNT 110 788*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MGRQPCCEKV GLKRGPWTIE EDHKLMSFIL NNGTHCWRSV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGGF TEDEEDQIIE LHARLGNRWS KIASHFPGRT DNEIKNHWNT RIKKRLKLLG 120 VDPLTHMPIK DNESKLIKGG ETYTGSNSSS TEGREVEIKA TLSEPEEKAQ EIELTLDETT 180 DLLDNYRMLC GDIGASQLRN IRDIADTTIS SQDNATTTTS TSTMEESMQQ WVDSTVDSML 240 SWDGFDCFEP DIFFFQNCQN LTQLPPHKSY FL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 1e-82 | MYB family protein |