PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM71420.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 204aa MW: 23200.8 Da PI: 9.2323

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM71420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.8	2.2e-33	123	181	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d++vv++tYeg+H+h+ OWM71420.1 123 LDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLTRDESVVVTTYEGTHTHP 181 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MENYQMFFPC SSSAAPPAYG GGGGTMNFDV GSTYSSSGLF GLKSATNHIA DISLSSAPEV 60 TNKDHHDQYQ LHQDPDHHHC VRNNHQGVES ESTEKMSGKK LKGGKKVRRP RFAFQTRSQV 120 DILDDGYRWR KYGQKAVKNN KFPRSYYRCT YQGCNVKKQV QRLTRDESVV VTTYEGTHTH 180 PVEKSTDNFE HILSQMQIYP LPYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	9e-58	WRKY family protein