PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71361.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 355aa    MW: 40146.6 Da    PI: 4.4783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.6e-12188231654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  OWM71361.1 188 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYLKEL 231
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MEFYEQYASY PFEEWLSQRK SHPSWEALLP TEQMMMMNMD YELLSSTHPG FSNYVDSALE  60
ENPLGDNYFL SSCCEGFSSS PSLDQELNYS AGSYCPIGRD QFQAQAVMDN SSYSTYETPR  120
SNLPVQEDNY AILSLMDEDV FGDDFEAPMD ILGACKMEPA VQSPEPVPVP GGPKGRVKRL  180
EGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTSI LGDTIDYLKE LLEKIRLLQD  240
EVELGPNQLN MVQLIEEMKP NEMLIRNSPK FNVERRKEDT KVEICCSGKP GLLLSTVNTL  300
EALGLEIQHC VISCFSDFAL QASCSLEMGQ RGIMVSPEDV KQALFRNAGY GGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191198ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-78bHLH family protein