PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71345.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 341aa    MW: 37215.2 Da    PI: 4.5693
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.62.2e-15212248135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp +Rrgp g++tLCnaCGl+++ k++
  OWM71345.1 212 CQHCGISEsaTPAMRRGPAGPRTLCNACGLMWANKET 248
                 ********9************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MASAYPQPLQ ARAIGEQVGE VDGECDDDDD TMEDMEEASH SNVNSGNSCG MNCGNGYGGV  60
ALAPRTNELT ISFDGEVYVF PAVTPEKVVL LNSEMTQYVQ ALLLLLGGSD APSIVPAVEV  120
PYEHNGGLGE NSKNSNRLRR IASLVRFREK RKERCFDKKI RYTARKEVAQ RMHRKNGQFA  180
SVNESHNAST WDATQSCSQE RTPIPETFLR RCQHCGISES ATPAMRRGPA GPRTLCNACG  240
LMWANKETPV DVKHAAQNGG HFCEYLDDHG VSGGSSTDDQ KLNDQSVLPD NRDFTESDDI  300
IAQTLPMIAN SSADEDEQGV GRLIEFANPL ATDIGIPLDF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.26e-57GATA family protein