PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71199.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 278aa    MW: 30911.8 Da    PI: 8.0711
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-2098147255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r+++ +g+W+AeIrdp     +  r++lg++ t+eeAa+a+++a+++++g
  OWM71199.1  98 VYRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTYPTPEEAARAYDQAARRIRG 147
                 69*******.**********72....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MCGGAIISGF IEAKRGRRLT SEVLWSELDP DFSGLLGLPD GPNQLPAGRI HPKPRGQLNK  60
DVGTDKKATR KMRRVGDKSS SDEEATGKEG GEKGRKNVYR GIRQRPWGKW AAEIRDPHKG  120
VRVWLGTYPT PEEAARAYDQ AARRIRGDKA KLNFSYPPHC QPPAPTPPPP APLEPPSKKR  180
PLDPTGHAPP GYFQSDIYPM GMVDESPSSS VTTSSTDFEL KEQISSLESL LGLEPEELAP  240
EQPRPCSRTI EPEAADLWML EDLVTHQYHK QYNNQLIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-39ERF family protein