PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM70847.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 334aa    MW: 35908.6 Da    PI: 9.9324
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM70847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1017.2e-32262319359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  OWM70847.1 262 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERALDDPTMLIVTYEGEHNHP 319
                 99***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MAVELMMDCG SDGYALTEAA SAGIKSVENL IKLLAQPYHE AAPSSSAPRP ESSDIEVATD  60
AAVNKFRKVI SLLDRSRTGH ARFRRAPVSS PEQGPTRVEE VALSGGSAFK VYCPAPIQRL  120
PPLPHSQNPG AQRSAPPAAE RKDSVPGTAV TKTINFAPSQ QVSNSAANSS FLSSLTTGDN  180
DSVQRSMSSS GFQITTHHKP PLSMSSSYST MKRKCTSMDD GALKCGGSSS GRCHCSKKRK  240
SRLKRVVRVP AISSKMADIP PDDYSWRKYG QKPIKGSPHP RGYYKCSSMR GCPARKHVER  300
ALDDPTMLIV TYEGEHNHPV SAADTKSAFV LESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.14e-75WRKY family protein