PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70775.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

GRF

Protein Properties

Length: 573aa MW: 60704.1 Da PI: 7.17

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.2	8.2e-25	225	268	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e OWM70775.1 225 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVE 268 79***************************************998 PP
2	QLQ	64	3.7e-22	155	191	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+++yKy++an+PvP++Ll +i+k OWM70775.1 155 GPFTPSQWMELEHQAMIYKYINANVPVPSNLLIPIRK 191 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MEFGAVGLDG LVGGSDPEDK QKLYGSAFFR QLERPPSEDA DEWRVINSSS SGSSNRGGSA 60 KVAKFGDDYF SVSAPKAALK GSSNSLFSDA QQSQHMLCFS SSASSVSPLS KSESQPPALP 120 CFSYTPSVYS NYAGLASGGL NGGNMHGMAL GGGRGPFTPS QWMELEHQAM IYKYINANVP 180 VPSNLLIPIR KAFESAGFSC YASGLLRPNS LGWGGFQLGF SNSTDPEPGR CRRTDGKKWR 240 CSRDAVADQK YCERHMNRGR HRSRKPVEGL HSGHPVSGGP AATTATVCAT TATPSAASAN 300 KQGLPVGSVV PGSGASHNSY TDFQSGVLSL SADSSLNRFF MNKENVSEKI QNPSSGFSMI 360 SPSTNVKSKA TPFLIDSSSE RTSSLLNSCQ NLGTLKDLTD RETESDHSIR HFINDWPVMS 420 VQSSDATHLS ISIPMASNDN RVTLSPLRSA HDLDQVQMNL GVGGGTGYGE QVHKQTVNWI 480 PISWETSMGG PLGEVLHNAN NSNSSTDCKN SSVLNLMTEG WESSSSSPLG SSPTGVLQKT 540 AFGSVSNSSA GSSPRVEENR SKPLEGSAMC SEV

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MEFGAVGLDG LVGGSDPEDK QKLYGSAFFR QLERPPSEDA DEWRVINSSS SGSSNRGGSA  60
KVAKFGDDYF SVSAPKAALK GSSNSLFSDA QQSQHMLCFS SSASSVSPLS KSESQPPALP  120
CFSYTPSVYS NYAGLASGGL NGGNMHGMAL GGGRGPFTPS QWMELEHQAM IYKYINANVP  180
VPSNLLIPIR KAFESAGFSC YASGLLRPNS LGWGGFQLGF SNSTDPEPGR CRRTDGKKWR  240
CSRDAVADQK YCERHMNRGR HRSRKPVEGL HSGHPVSGGP AATTATVCAT TATPSAASAN  300
KQGLPVGSVV PGSGASHNSY TDFQSGVLSL SADSSLNRFF MNKENVSEKI QNPSSGFSMI  360
SPSTNVKSKA TPFLIDSSSE RTSSLLNSCQ NLGTLKDLTD RETESDHSIR HFINDWPVMS  420
VQSSDATHLS ISIPMASNDN RVTLSPLRSA HDLDQVQMNL GVGGGTGYGE QVHKQTVNWI  480
PISWETSMGG PLGEVLHNAN NSNSSTDCKN SSVLNLMTEG WESSSSSPLG SSPTGVLQKT  540
AFGSVSNSSA GSSPRVEENR SKPLEGSAMC SEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	3e-54	GRF family protein