PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70707.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 464aa MW: 50154 Da PI: 5.484

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.3e-11	294	336	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L OWM70707.1 294 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 336 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MVLGPNGVVW MDGVPEDDDA ISWARNPAAG EEVDPDPKQD DISMSMSMSF RSMLDSEAAA 60 NWYFNPQPPP PHQQPLHDLS AGLHQQPPPD LHSLAFLDSS SSACSPTQPP FLGFDLGPDA 120 SLHFLPPFDP PNLLPNPNPN PAAAAPPELG PGLLGFFEGL DGPSSLNPPL FFNRPKVLRP 180 LEVLPQMGAQ PTLFQKRAAK LGISGGPDFG EFDNKRKRVK EDVGEIVGDD VVSGFNYDSD 240 EGTDQIMSGA CGKIAIGGGD SSGKNETSVG NNSTVTVGGD QKGKKKGLPA KNLMAERRRR 300 KKLNDRLYML RSVVPKISKM DRASILGDAI DYLKELLQRI NDLHNELEST PPGTLPPTTN 360 FHPLTPTPPT LPCRVKEELG PSSLQSPKGQ PARVEVRVRE GRAVNIHMFC ARRPGLLLST 420 MRALDNLGLD IQQAVISCFN GFALDVFRAE VALSLSISIS RITF

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MVLGPNGVVW MDGVPEDDDA ISWARNPAAG EEVDPDPKQD DISMSMSMSF RSMLDSEAAA  60
NWYFNPQPPP PHQQPLHDLS AGLHQQPPPD LHSLAFLDSS SSACSPTQPP FLGFDLGPDA  120
SLHFLPPFDP PNLLPNPNPN PAAAAPPELG PGLLGFFEGL DGPSSLNPPL FFNRPKVLRP  180
LEVLPQMGAQ PTLFQKRAAK LGISGGPDFG EFDNKRKRVK EDVGEIVGDD VVSGFNYDSD  240
EGTDQIMSGA CGKIAIGGGD SSGKNETSVG NNSTVTVGGD QKGKKKGLPA KNLMAERRRR  300
KKLNDRLYML RSVVPKISKM DRASILGDAI DYLKELLQRI NDLHNELEST PPGTLPPTTN  360
FHPLTPTPPT LPCRVKEELG PSSLQSPKGQ PARVEVRVRE GRAVNIHMFC ARRPGLLLST  420
MRALDNLGLD IQQAVISCFN GFALDVFRAE VALSLSISIS RITF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	284	302	KKKGLPAKNLMAERRRRKK
2	296	303	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	3e-86	bHLH family protein