PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM70575.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Nin-like

Protein Properties

Length: 924aa MW: 102050 Da PI: 5.8898

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM70575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.6	1.4e-29	600	651	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l++l++yF++++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rkik++ OWM70575.1 600 AEKTITLQVLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKV 651 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 924 aa Download sequence
MEDIVFSPST VLGTASGSIM DIDLMDELLL DGCWLETMCG SEFLQPSHVC DPLFMWATPE 60 VSTVEAKGQE LGQGPLVPED VQVVGQNAIG APALVPSHLG NLTSDGSDLR RTWWIGPRVN 120 SGGPATSVMD RLIKALGYIQ DFTKDKDVLI QLWVPVNRGG KQVLTTSEQP FSLNSSSGRL 180 LSYRDVSVHY EFSAEKDSKE MVGMPGRVFL GKVPEWTPDV RFFRSDEYAR VDHAQQFDVR 240 GTLALPVFEQ SSRTCLGVIE IVMTTQKIKY RPEIESVCKA LEAVDLRSSG IFSNRNIEYA 300 PKSYEAALPE ILEVLRSACK THGLPLSQTW IPCTQQGKAG CRHSDENFAL CVSPVDTACH 360 VADSRVQGFH EACSEHHLLM GQGVAGKAFL TNQPCFSPDV TSFGKTDYPL SHHARMFGLC 420 GAVAIRFRSI QTGTADYVLE FFLPRDCKEL EDQRTMLTSL SVIIQQICRN LRVVTDEELR 480 DEVTPSSFYR PMADHLESEP THREETPGGE NVSSEKNSSR ENSQRSGFVS GVDGDRLPLA 540 ANKDKMGEIL SEEWMEFGQQ NRNSTLNASS EHCEDRSSLG DGGFSGLGLE KPGEKRRSKA 600 EKTITLQVLR QYFAGSLKDA AKSLGVCPTT LKRICRQHGI NRWPSRKIKK VGHSLQKLQV 660 VIDSVQGTSG SLQVGSFYTN FPELASPNLS TTGPFPSPKT FIPQKPQSTE PESANIGSQS 720 AASKSSSSSG SQSSSSSQCC SSGRQQHSSS FDVVGSEDPM VSENDVSGQL KRFRGEVELN 780 GSSHEGLGTK LTPRSQSYEI LKETRNPETP PDVQFHCSDA SRKLEPLRVK VTYGEEKIRF 840 RLQKGWGLMD LWKEIQRRFS VEDPARFDLR YLDDDYEWVM LTCDADLEEC INVSRSFQGN 900 TIRLSLQVSH HYHGSSVGSS GGPL

Sequence ? help Back to Top

Protein Sequence Length: 924 aa Download sequence

MEDIVFSPST VLGTASGSIM DIDLMDELLL DGCWLETMCG SEFLQPSHVC DPLFMWATPE  60
VSTVEAKGQE LGQGPLVPED VQVVGQNAIG APALVPSHLG NLTSDGSDLR RTWWIGPRVN  120
SGGPATSVMD RLIKALGYIQ DFTKDKDVLI QLWVPVNRGG KQVLTTSEQP FSLNSSSGRL  180
LSYRDVSVHY EFSAEKDSKE MVGMPGRVFL GKVPEWTPDV RFFRSDEYAR VDHAQQFDVR  240
GTLALPVFEQ SSRTCLGVIE IVMTTQKIKY RPEIESVCKA LEAVDLRSSG IFSNRNIEYA  300
PKSYEAALPE ILEVLRSACK THGLPLSQTW IPCTQQGKAG CRHSDENFAL CVSPVDTACH  360
VADSRVQGFH EACSEHHLLM GQGVAGKAFL TNQPCFSPDV TSFGKTDYPL SHHARMFGLC  420
GAVAIRFRSI QTGTADYVLE FFLPRDCKEL EDQRTMLTSL SVIIQQICRN LRVVTDEELR  480
DEVTPSSFYR PMADHLESEP THREETPGGE NVSSEKNSSR ENSQRSGFVS GVDGDRLPLA  540
ANKDKMGEIL SEEWMEFGQQ NRNSTLNASS EHCEDRSSLG DGGFSGLGLE KPGEKRRSKA  600
EKTITLQVLR QYFAGSLKDA AKSLGVCPTT LKRICRQHGI NRWPSRKIKK VGHSLQKLQV  660
VIDSVQGTSG SLQVGSFYTN FPELASPNLS TTGPFPSPKT FIPQKPQSTE PESANIGSQS  720
AASKSSSSSG SQSSSSSQCC SSGRQQHSSS FDVVGSEDPM VSENDVSGQL KRFRGEVELN  780
GSSHEGLGTK LTPRSQSYEI LKETRNPETP PDVQFHCSDA SRKLEPLRVK VTYGEEKIRF  840
RLQKGWGLMD LWKEIQRRFS VEDPARFDLR YLDDDYEWVM LTCDADLEEC INVSRSFQGN  900
TIRLSLQVSH HYHGSSVGSS GGPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein